You are seeing only the results that can change clinical managementYou are also seeing the results that change no clinical management
Levels C and D are replicated, but there is no evidence that knowing them improves an outcome: that is why the report does not open with them.
Pharmacogenomics
How your variants may affect the response to specific medications. It is the section with the strongest clinical support in the report: the recommendations come from international guidelines (CPIC, DPWG) applied by an engine, not from an interpretation of ours. Search by drug or by gene.
All 29 drugs, by what they mean for you
Significant interaction2
▲Significant interaction
Intermediate metabolizer: clopidogrel activation is reduced. In acute coronary syndrome or angioplasty, CPIC recommends prasugrel or ticagrelor if there is no contraindication.
Same mechanism as warfarin, and the same three genes govern it. It is the most widely used coumarin in Argentina. An important caveat: the CPIC algorithm is validated on warfarin, not on acenocoumarol, so here the genotype guides but does not replace INR monitoring.
Intermediate metabolizer: greater exposure to the drug and more risk of neuropsychiatric effects, which are the most frequent cause of discontinuation of antiretroviral treatment. CPIC provides for lowering the daily dose while maintaining efficacy.
An antihypertensive with limited use. In slow acetylators a higher incidence of drug-induced lupus-like syndrome is described. Weaker evidence than that for isoniazid.
A cornerstone of tuberculosis treatment. As a slow acetylator you reach higher concentrations at standard doses, and with that more risk of hepatotoxicity. It changes neither the indication nor the initial dose: it changes the monitoring. It is one of the few drugs in the report whose recommendation does not rest on a professional guideline —neither CPIC nor DPWG— but on a replicated association and one randomized trial, which is why it appears at level B.
Methadone also depends on CYP2B6. With slower metabolism the concentration rises and the risk of QT prolongation and respiratory depression increases. Titrating slowly is advisable.
In G6PD deficiency rasburicase can cause severe hemolysis and methemoglobinemia, which is why it is contraindicated. No deficiency was detected, but the chip measures 63 of 171 positions in the gene: before prescribing it, measuring enzyme activity is called for, as it is the reference method.
Increased sensitivity: it requires a lower than standard dose to reach the same effect. The three genes in the algorithm point in the same direction — CYP4F2 *1/*1 does not add the extra requirement that carriers of *3 bring, so nothing offsets the VKORC1 sensitivity. Use a pharmacogenetic dosing algorithm and check the INR more often at the start.
Much less dependent on the affected transporter. And since your ABCG2 has normal function, the dose cap CPIC imposes when that transporter is compromised does not apply either. The two genes have to be looked at together: with SLCO1B1 alone the recommendation would be incomplete.
Non-expresser: you metabolize tacrolimus at the rate the package insert expects. CYP3A5 expressers are the ones who require 1.5 to 2 times the dose to reach the same blood level. CYP3A4 goes along with normal activity, so there is nothing to correct that reading — if it were *22 one would have to expect accumulation even with a non-expresser CYP3A5.
Sevoflurane, isoflurane, desflurane. Susceptibility to malignant hyperthermia depends above all on RYR1, a gene this test cannot rule out. A negative here is not clearance: a personal or family history of an anesthetic complication still overrides any genetic result from this platform.
A depolarizing muscle relaxant, same risk mechanism as the inhaled agents. The same warning applies: this test does not allow susceptibility to be ruled out.
This traffic light describes how your variants affect the metabolism of, or the response to, each drug. It does not take into account allergies, drug interactions, kidney or liver function, or your clinical situation. The prescription is always decided by the professional.
Technical detail by gene
The genotype and the phenotype that explain each recommendation above.
In acute coronary syndrome or angioplasty, consider an alternative antiplatelet agent (prasugrel or ticagrelor) if there is no contraindication: clopidogrel activation is reduced.
VKORC1rs9923231 A/A●ActionableAEstablished clinical use
Phenotype
Increased sensitivity
Drugs affected
Warfarin / acenocoumarol
Combined with CYP2C9 *1/*1, it predicts a lower-than-standard initial dose requirement. Use a pharmacogenetic dosing algorithm if coumarin anticoagulation is started.
CPIC · gene index↗CPIC — one guideline per drug: warfarin 2017, NSAIDs 2020, phenytoin 2014
Chip coverage
41 de 88 posiciones · 45 alelos indistinguibles
CYP4F2*1/*1✓No findingsAEstablished clinical use
Phenotype
Normal activity
Drugs affected
Warfarin / acenocoumarol
CYP4F2 regulates vitamin K availability: people who carry *3 need somewhat MORE warfarin than VKORC1 and CYP2C9 alone predict. That is not your case, so there is nothing to offset the increased sensitivity of your VKORC1 — the lower initial dose stands.
CYP3A4 and CYP3A5 metabolize many of the same drugs, so they are read together. With normal CYP3A4 activity and a non-expresser CYP3A5, your elimination profile is the one package inserts assume: standard dosing. Carriers of *22 eliminate more slowly and may accumulate tacrolimus or statins at usual doses.
PharmGKB · CYP3A4↗No CPIC guideline of its own — it modulates dosing through CYP3A5
Chip coverage
17 de 46 posiciones · 31 alelos indistinguibles
IFNL3rs12979860 C/T✓No findingsBSolid support
Phenotype
Intermediate response genotype
Drugs affected
Peginterferon alfa (hepatitis C)
This genotype used to predict how likely a person was to respond to interferon treatment for hepatitis C. It is among the best-measured items on the panel: the position the guideline interrogates is covered. But direct-acting antivirals replaced interferon-based regimens and cure more than 95% regardless of this genotype, so today the datum barely changes a decision. It is reported for completeness and with that caveat, not because it will guide a treatment.
CFTRF508del / referencia✓No findingsAEstablished clinical use
Phenotype
Carrier — no indication for modulators
Drugs affected
Ivacaftor and the other CFTR modulators
CFTR modulators are indicated for people WITH cystic fibrosis, and which one applies depends on what variants are present in BOTH copies of the gene. You have one copy with F508del and one normal copy: you are a healthy carrier, not a patient, so none of these drugs apply to you. It appears here because the same gene reads differently depending on the question — for what the finding does mean for you, see the Carriers section.
You acetylate isoniazid more slowly than average, so at standard doses you reach higher and more sustained concentrations. That increases the risk of hepatotoxicity, the adverse effect that cuts tuberculosis treatments short. It does not mean not using it: it means that liver function monitoring at the start of treatment is not optional in your case, and that if transaminases rise there is a pharmacogenetic explanation on top of the usual ones. About half of people of European ancestry are slow acetylators.
Standard thiopurine dosing as far as TPMT is concerned. The other half of the recommendation depends on NUDT15, which the chip covers much worse — see the next row.
No risk variants detected, but this is one of the worst-covered genes on the panel: 17 of 20 positions are left out and 18 alleles are indistinguishable. In people of Asian or Indigenous American ancestry —where NUDT15 variants are more frequent— a negative here carries little weight, and in the face of myelosuppression with thiopurines, genotyping by a targeted method is warranted.
HLA-B*57:01Negativo✓No findingsAEstablished clinical use
Phenotype
No risk allele
Drugs affected
Abacavir
Very low risk of hypersensitivity. It matters to understand where this result comes from: the array does not type HLA directly, it infers it from neighboring markers that usually travel with the allele. The inference is good but it is not a typing, and the reaction to abacavir can be severe, so before prescribing it the validated HLA-B*57:01 test is still called for.
ABCG2rs2231142 G/G✓No findingsAEstablished clinical use
Phenotype
Normal transport function
Drugs affected
Rosuvastatin
ABCG2 moves rosuvastatin out of the cell. With decreased function it accumulates and the risk of myopathy rises, which is why CPIC caps the dose. Your function is normal, so rosuvastatin can be prescribed without that cap — which makes it a solid alternative to simvastatin, which your SLCO1B1 genotype does compromise.
CACNA1SReferencia/Referencia✓No findingsAEstablished clinical use
Phenotype
No known risk variants
Drugs affected
Inhaled anesthetics, succinylcholine
CPIC interrogates a short list of variants in this gene and none is present. But this does NOT allow you to be considered not susceptible to malignant hyperthermia: most of the risk lives in RYR1, which this test cannot rule out. See the row below.
RYR1No informable—Not assessableAEstablished clinical use
Phenotype
Not assessable by this methodology
Drugs affected
Inhaled anesthetics, succinylcholine
The variants that cause malignant hyperthermia are spread across an enormous gene and are mostly private to each family. An array measures fixed positions and cannot sequence the gene, so a negative result here means nothing. If there is a personal or family history of an anesthetic complication, referral for specific testing (RYR1 sequencing and, depending on the case, an in vitro contracture test) is warranted, and the anesthesiologist should be told regardless.
Efavirenz is eliminated more slowly, which increases exposure and with it the neuropsychiatric adverse effects —vivid dreams, dizziness, insomnia— that are the most frequent cause of treatment discontinuation. CPIC recommends considering 400 mg daily instead of 600 in intermediate metabolizers.
G6PDClase IV (normal)✓No findingsAEstablished clinical use
Phenotype
Normal enzyme activity
Drugs affected
Rasburicase, primaquine, nitrofurantoin, dapsone
No deficiency among the variants evaluated. Watch the coverage: the chip measures 63 of the 171 positions the guideline interrogates, so a negative lowers the probability but does not rule it out. Faced with an indication for rasburicase —where the deficiency can cause severe hemolysis— measuring enzyme activity is warranted; it is the reference method and it is inexpensive.
Most people of European ancestry do not express CYP3A5 and metabolize tacrolimus more slowly. For this genotype CPIC recommends starting at the standard dose; it is the expressers who need between 1.5 and 2 times more. Relevant when a transplant is involved: it shortens the time to reach therapeutic levels.
CYP2D6No determinado—Not assessableAEstablished clinical use
Phenotype
Not assessable with this platform
Drugs affected
Codeine, tramadol, tamoxifen, antidepressants
The array does not reliably resolve duplications, deletions, or CYP2D6/CYP2D7 hybrids. If the CYP2D6 phenotype is needed, it requires a targeted assay (CNV + sequencing).
A “normal” in a partly measured gene is not a safe normal
Each card carries how many of the positions the guideline interrogates this study actually measures, and how many alleles remain indistinguishable. Where that bar is low, the reference result means “none of the variants this chip can see were found”, and not “there are none”. The calls are made by PharmCAT on the CPIC and DPWG guidelines: the engine supplies the interpretation, we supply the dose of each variant.